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ionLIMS

System requirements

  • Microsoft Windows 7 oder higher
  • Microsoft Office 2007 with MS Access
  • Screen resolution 1920x1280 px
  • For fusions: local IonReporter server
  • For annotation: Annovar installed locally

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Supported systems

  • IonTorrent PGM, Proton and S5
  • TorrentSuite > v4.4
  • Ion OneTouch2, IonChef
  • qPCR systems: ABI StepOne/Plus, Roche LightCycler 480, BioRad iQ5
    * other system upon request
  • Label printer e.g. Brady BBP12

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S5XL

AmpliSeq-Tube

Supported protocols

  • AmpliSeq DNA/RNA
  • Tag Sequencing
  • qPCR-based DNA concentration measurements:
    TaqMan RNAseP, Qiagen GeneRead, IlluminaQC
  • IonXpress/IonCodeTag barcodes
  • Targeted Panels, Comprehensive Panels, Exome

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FAQ
The ionLIMS database builds on MS Access and therefore multiple user can use the database independently.
No. ionLIMS uses the data generated from the TorrentSuite software, which is perfectly suited for targeted IonTorrent sequencing.
In most of the cases custom protocols are integretable. We are happy to discuss with you any needs you have.
ionLIMS transfers .bam, .bam.bai, .vcf, .xls and fusion files. In addition data from the coverage analysis and sampleID-plugIns as well as run-QC files will be transfered.

ionLIMS